CDS

Accession Number TCMCG051C08749
gbkey CDS
Protein Id XP_024449825.1
Location complement(join(16897984..16898097,16898912..16899016,16899845..16899904,16899986..16900124,16900211..16900395,16901038..16901121,16901224..16901346,16901434..16901613,16901696..16901765,16901857..16901953,16902065..16902140,16902999..16903088,16903185..16903298,16904700..16904771,16904890..16905063,16905154..16905224,16905329..16905477,16905749..16905815,16905938..16906154,16906343..16906434,16906530..16906654,16907081..16907727,16907926..16908072,16908223..16908339,16909620..16909750,16909834..16910002,16910115..16910201))
Gene LOC7478835
GeneID 7478835
Organism Populus trichocarpa

Protein

Length 1233aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024594057.1
Definition uncharacterized protein LOC7478835 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category O
Description Holliday junction DNA helicase ruvB N-terminus
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002090        [VIEW IN EMBL-EBI]
GO:0002092        [VIEW IN EMBL-EBI]
GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0007610        [VIEW IN EMBL-EBI]
GO:0007611        [VIEW IN EMBL-EBI]
GO:0007612        [VIEW IN EMBL-EBI]
GO:0007613        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030100        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044456        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045202        [VIEW IN EMBL-EBI]
GO:0045211        [VIEW IN EMBL-EBI]
GO:0045807        [VIEW IN EMBL-EBI]
GO:0048259        [VIEW IN EMBL-EBI]
GO:0048260        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050804        [VIEW IN EMBL-EBI]
GO:0050805        [VIEW IN EMBL-EBI]
GO:0050877        [VIEW IN EMBL-EBI]
GO:0050890        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051966        [VIEW IN EMBL-EBI]
GO:0051967        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097060        [VIEW IN EMBL-EBI]
GO:0098590        [VIEW IN EMBL-EBI]
GO:0098794        [VIEW IN EMBL-EBI]
GO:0099177        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTGAAACCAGACGCAGCTCCTCCTCCTCCTCCAAACGATCTCTTCCTCCCTCTTCTCCTCCTCCCTCTTCTAAAAGATGCAAAGCGGCTGCTGCTGCTGCTGCATCTGAGGTATCATCGTCGACCAGCGATGTACCGACACCGGTACTGCCGATAGAAAATACAAGTCAGGAAAAGGATTCCGGGTCTGAATTAGATTTGCAGGCTACTAAGTCTGGAGAGGAGACTCAAGCCGAGGAATTGGTGTCTTTAGATGAAGTCACTGCCAATGGAGAGAAATCCAAGGGTGCAGTAGTGCTGAACAAGTCAAAGAAGCGAGTACCAAAATCAGTAAAATCTAATGCCAAGGCTGCATGGGGCCAATTGCTGTCCCAATGTTCACAGAACCCTCACAAGCTGATAAATAGCACTCTTTTCACTGTTGGTCAAAGCCGACAATGCAATTTATGGCTTAATGATTCATCGATCAGTACTATTTTATGCAAACTGAAGCACATAGAGCGTGGAGGTGCACCTATTGCCTTATTGGAAATCACTGGGGGAAAAGGAGCAGTCCAAGTAAATGGTAAACTTTATCAAAAGAATGAAACTTTAGCATTAAATGGAGGCGATGAAGTGATTTTCACTACTTCTGGAAAACATGCATATATATTTCAGCAGCTAACAAGCAATAGCTTAGGCACACCAGGCATGCCTTCTGTGAGCATCTTAGAAGCCCAGAGTGCTCCTATAAAAGGGATTCACATTGAGGCAAGGTCTAGAGACCCCTCAGATTATGCAGGCGCATCAATATTGGCTTCTTTGTCACATCTTCTTCCACCTGCTGCCAAAACTGGTGAGGATGGGCAGCAAAATACAGATTTTTCCACCTTGCCTTCTGGCTGCGAAGCGTCCGAAGATCATGTTCCAGATGTTGAAATGAAGGATGGCACAAGCAATAATGATCCCAGTGATGTTTCCCCAAGCGAGAAAGCTGTTGCTCCTTCCTCTAATGCTGCCAATGAAAATGCTAATGCTGATAGCATGAGATTGGGTGCTTGTACAAATGCAGTTATTGGAAGGATTCCAAATTCAACTTATGAGTTAAAGCCATTGTTGCGGATGCTTGCAGGTTCATCTTCTGAATTTGATAAAATATTTGATGAGAGGGAAAGGAGAGAAATCCTCAAGGATCTTGATCCTCCACCAGTTCTAATGTCCACTAGACGGCAGTTGTTTAAGGATAGTTTACAAAAAGGAATTCTAAACCCTGAAGAGATTGAAGTTTCATTTGACAATTTCCCATATTATCTAAGTGATACAACTAAGAAAGTTTTGATAGGTGGTGCATTCATCCATCTGAAATGTGGTAACAAAGTTGCAAAGTTTGCTTGCGATCTCCCTACTGTGTCCCCACGCATGTTACTATCTGGTCCTGCAGGCTCTGAAATATATCAGGAGACTCTGACAAAGGCACTTGCCAAAGATGCTGGTGCTAGACTATTAATTGTGGATTCGCTTCAATTGCCTGGTGGATCAATACACAAAGAAGCTGATTCTTCTAGAGAAAGTTTAAAATCAGAAAGAGTCTCTGCATTTGCCAAAAGAGCCATGCAGGCAGCATTACTAACTAAGAAACCTACTTCTAGTGTTGAGGCTGGCATAACTGGTTGCTCTACATTTGGTTCTCATGCCCGGCCAAAGCAGGAAACTTCTACTGCATCATCCAAAAACTACACGTTTAAAACAGGTGACAGAGTAAAGTTTGTGGGTACCTCCTTGGCATCTGCAATTTCTTCTTTGCAGCCTCCTTTAAAGGAACCAACAATTGGTTTACGAGGCAGGGTGGTCCTTACTTTTGAAGGAAACAGTTCCTATAAAATTGGCGTTAGATTTGATCAATCCATCCCAGAAGGCAATGACTTGGGCGGTCGTTGTGAAGAGGATCATGGTTTCTTTTGTACAGCTAATTCACTTCGTTTGGATAGTTCTGGAGGAGAAGATGTTGACAGGCTTGCTATTAATGAGCTCTTTGAGGTTGCTTTAAATGAAAGTAAAAATGCCCCCCTAATCTTGTTTTTGAAAGACTTAGAGAAGTCTCTGGTGGGAAATCAAGATGCATACACTTCCCTAAAGAGTAAGCTTGAGAATTTACCAGAGAAAGTTATCGTAATGGGCTCCCATACCCAGATTGACAATCGTAAGGAGAAGTCCCATGCTGGTGGTCTTCTATTTACGAAGTTTGGCGGCAACCACACTGCATTACTTGATCTTGCTTTTCCGCCTCTAATTCAGGATAGCTTTGGAAGACCGAGTGATAGGAGCAAAGAAACACCCAAAGCAATGAAGCAGCTCTCACGACTTTTCCCAAACAAAGTAACAGTACAGTTGCCACAGGATGAAGCGTTGCTTGTGGACTGGAAACAGCAGTTGGAGCGTGATATTGAAACTCTGAAAGCACAAGCCAACATTTTTAGCTTTCGTTCAGTTCTCAGCCGAGTTGGTTTGTGTTGCCCTGACCTAGAAACTGTGTGCCTTAAAGATCAAGCCCTTACAACTGAAAGTGTGGAGAAAGTAGTGGGATGGGCTTTGAGTCACCACTTTATGCATTGTTCTGAAGCCTCTGTCAATGATTCCAAAATTCTTATATCTTCTGAAAGCATTTTGTATGGATTGAGCGTTCTACATGGCGTACAAAATGAAAGCAAGAGCTTGAAGAAGTCACTGAAGGATGTGGTCACTGAGAATGAATTTGAGAAGAAACTTCTAGCAGATGTCATGCCTCCTAGTGACATTGGAGTTTCCTTTGATGACATTGGAGCCTTAGAAAATGTGAAGGATACCTTGAAGGAACTGGTTATGCTCCCTCTGCAAAGACCTGAATTGTTTTGCAAAGGACAGCTGACTAAGCCTTGCAAGGGAATATTGCTGTTTGGGCCTCCTGGTACTGGGAAAACAATGCTGGCAAAGGCTGTAGCAACTGAGGCTGGTGCAAACTTTATAAATATATCTATGTCGAGCATTACTTCGAAGTGGTTTGGAGAAGGCGAAAAGTATGTCAAGGCAGTGTTCTCTTTAGCTAGTAAAATCGCTCCTAGTGTTGTTTTTGTTGATGAGGTGGATAGCATGTTGGGAAGACGTGAAAATCCAGGGGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTCATGGTGAATTGGGATGGCCTGCGTACAAAAGATAAAGAACGAGTCTTGGTACTTGCTGCCACAAATAGACCTTTTGACCTTGATGAGGCTGTTATTAGGAGACTTCCCCGGAGATTAATGGTTAACTTGCCAGATGCACCGAATAGAGAAAAAATCCTGAGGGTTATCTTGGCCAAAGAAGATTTGGCACCTGATGTTGATTTAGAAGCAGTTGCAAATATGACTGATGGCTATTCTGGGAGCGATATAAAGAATCTTTGTGTTACTGCTGCACATTGTCCTATACGAGAAATTTTAAAAACGGAAAAGAAGGAAAGAACTTTGGCATTGGCTGAGAATAGTCCATTGCCCACATTGTACAGCAGTTCTGACATCCGTCCTCTTAAGATGGAGGATTTTAGATATGCACATGAACAGGTGTGTGCAAGTGTGTCGTCAGAGTCCACAAACATGAACGAGCTCCTCCAATGGAATGATCTATATGGAGAAGGTGGATCGAGAAAGAAGAAATCGCTCAGCTATTTCATGTAG
Protein:  
MVETRRSSSSSSKRSLPPSSPPPSSKRCKAAAAAAASEVSSSTSDVPTPVLPIENTSQEKDSGSELDLQATKSGEETQAEELVSLDEVTANGEKSKGAVVLNKSKKRVPKSVKSNAKAAWGQLLSQCSQNPHKLINSTLFTVGQSRQCNLWLNDSSISTILCKLKHIERGGAPIALLEITGGKGAVQVNGKLYQKNETLALNGGDEVIFTTSGKHAYIFQQLTSNSLGTPGMPSVSILEAQSAPIKGIHIEARSRDPSDYAGASILASLSHLLPPAAKTGEDGQQNTDFSTLPSGCEASEDHVPDVEMKDGTSNNDPSDVSPSEKAVAPSSNAANENANADSMRLGACTNAVIGRIPNSTYELKPLLRMLAGSSSEFDKIFDERERREILKDLDPPPVLMSTRRQLFKDSLQKGILNPEEIEVSFDNFPYYLSDTTKKVLIGGAFIHLKCGNKVAKFACDLPTVSPRMLLSGPAGSEIYQETLTKALAKDAGARLLIVDSLQLPGGSIHKEADSSRESLKSERVSAFAKRAMQAALLTKKPTSSVEAGITGCSTFGSHARPKQETSTASSKNYTFKTGDRVKFVGTSLASAISSLQPPLKEPTIGLRGRVVLTFEGNSSYKIGVRFDQSIPEGNDLGGRCEEDHGFFCTANSLRLDSSGGEDVDRLAINELFEVALNESKNAPLILFLKDLEKSLVGNQDAYTSLKSKLENLPEKVIVMGSHTQIDNRKEKSHAGGLLFTKFGGNHTALLDLAFPPLIQDSFGRPSDRSKETPKAMKQLSRLFPNKVTVQLPQDEALLVDWKQQLERDIETLKAQANIFSFRSVLSRVGLCCPDLETVCLKDQALTTESVEKVVGWALSHHFMHCSEASVNDSKILISSESILYGLSVLHGVQNESKSLKKSLKDVVTENEFEKKLLADVMPPSDIGVSFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDLEAVANMTDGYSGSDIKNLCVTAAHCPIREILKTEKKERTLALAENSPLPTLYSSSDIRPLKMEDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKKKSLSYFM